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revaise_registration

Registration stage for systematic reviews, supporting both pre-registration and registration with comprehensive versioning and amendment tracking.

URI: https://open-and-sustainable.github.io/revaise-model/schema/stages/registration

Name: revaise_registration

Classes

Class Description
Affiliation Institutional affiliation
AgreementMetrics Metrics for measuring agreement between reviewers/extractors
Amendment A documented change or clarification to a registration
Author Author of a review or publication
        Participant A person participating in the review process
ConfidenceInterval Confidence interval specification
ConflictPattern Pattern analysis of conflicts
ConflictResolution Resolution of conflicts or disagreements between reviewers
DatasetRef External dataset reference
DateRange A simple date range representation
ExternalTool External tool or platform used in the review process
FieldAgreement Agreement metrics for a specific field or item
ParticipantWorkload Workload statistics for a participant
PerformanceMetrics General performance metrics
ProcessMetrics Metrics related to process efficiency and completion
QualityControl Quality control measures and checks
Registration A registration entry referencing an external registry, with full versioning s...
RegistrationPolicy Policy governing registration requirements and constraints
RegistrationVersion An immutable version of a registration, capturing the exact state at a point ...
ResolutionMethodCount Count of a specific resolution method usage
ResolutionStatistics Statistics about conflict resolution
StageExecution Base class for executing a specific stage of the review
        RegistrationStage Stage for managing review registrations and pre-registrations, focusing on re...
StageOutput Output file or log produced by a review stage (results, logs, code, visualiza...
StageOutputRef Reference to a stage output in this or another RevAIse bundle
StageProtocol Base class for protocols defining how a review stage should be conducted
        RegistrationProtocol Protocol defining the registration approach and requirements
StageQualityControl Base class for quality control measures across review stages
        RegistrationQualityControl Quality control measures for the registration process
StageStatistics Base class for statistics collected about review stages
        RegistrationStatistics Statistics about the registration process
StageTrainingInfo Shared training information for review stages
ToolParameter Configuration parameter for a tool

Slots

Slot Description
accuracy Overall accuracy
address Street address of the institution
affected_sections Protocol sections affected by this amendment
affected_version_ids Version IDs affected by this amendment
affiliations Institutional affiliations of the author
agreement_rate Agreement rate for this field
agreement_sample_size Number of items compared
allowed_change_types Types of amendments allowed for this registration
allowed_templates List of allowed registration templates
amendment_author Author who made the amendment
amendment_date Date when amendment was made
amendment_description Detailed description of the amendment
amendment_id Unique identifier for the amendment
amendment_reason Reason for making the amendment
amendment_review_process Process for reviewing amendments
amendment_type Type of amendment (clarification, correction, etc
amendments List of amendments made in this version
approval_date Date when amendment was approved
approval_status Approval status of the amendment
approver Person who approved the amendment
area_under_curve Area under the ROC curve
assigned_items_count Number of items assigned to this participant
average_days_between_versions Average days between registration versions
average_items_per_day Average items processed per day
average_resolution_time Average time to resolve in minutes
backlog_size Number of items remaining
balanced_accuracy Average of sensitivity and specificity
base_agreement_metrics Base agreement metrics
base_calibration_performed Base calibration performed flag
base_completed_date Base stage completion date
base_completion_rate Base completion rate
base_discrepancy_resolutions Base discrepancy resolutions
base_double_checking_rate Base double-checking rate
base_items_completed Base items completed
base_participant_workloads Base participant workloads
base_protocol_date Base protocol date
base_protocol_description Base protocol description
base_protocol_deviations Base protocol deviations
base_protocol_id Base protocol identifier
base_protocol_notes Base protocol notes
base_protocol_software Base protocol software
base_protocol_tools Base protocol tools
base_protocol_training Base protocol training
base_protocol_version Base protocol version
base_qc_id Base QC identifier
base_qc_notes Base QC notes
base_qc_type Base QC type
base_spot_check_rate Base spot check rate
base_started_date Base stage start date
base_stats_id Base statistics identifier
base_stats_notes Base statistics notes
base_total_hours Base total hours
base_total_items Base total items
checks_performed Specific checks performed
checksum Checksum of the output file
city City where the institution is located
cohen_kappa Cohen's kappa for inter-rater agreement
common_causes Common causes of this conflict pattern
completed_items Number of items completed
completed_items_count Number of items completed by this participant
completion_rate Proportion of items completed
confidence_interval Confidence interval for the agreement rate
confidence_level Confidence level (e
conflict_of_interest_declared Whether conflicts of interest were declared
conflict_type Type of conflict being resolved
conflicting_items IDs of items in conflict
content_hash Cryptographic hash of the registered content
content_hash_algorithm Algorithm used to generate content hash
content_uri URI to access the registered content
corrective_actions Corrective actions taken
cost Estimated cost
count Number of times this method was used
country Country where the institution is located
current_registration_version Current version identifier of the registration
current_version_id Identifier of the current registration version
dataset_name Name of the dataset
days_to_first_registration Days from protocol creation to first registration
department Department or division within the institution
diagnostic_odds_ratio Ratio of odds of positive test in diseased vs non-diseased
diff_uri URI to view differences introduced by amendment
disagreement_count Number of disagreements
disagreement_types Types of disagreements observed
email Email address of the author
embargo_period Any embargo period for the registration
ended_at End time
expertise_areas Areas of expertise relevant to the review
f1_score Harmonic mean of precision and recall
false_discovery_rate Expected proportion of false discoveries
false_negative_rate Type II error rate
false_omission_rate Proportion of false negatives among negative calls
false_positive_rate Type I error rate
family_name Family/last name of the author
field_identifier Identifier of the field or item
field_level_agreements Agreement metrics for individual fields
final_decision Final resolved decision or value
first_item_date Date of first item processed
fleiss_kappa Fleiss' kappa for multiple raters
format File format or MIME type
frequency How often this pattern occurs
given_name Given/first name of the author
hash_algorithms Hash algorithms accepted for content verification
initial_version_id Identifier of the initial registration version
inputs Input artifacts
institution_name Name of the affiliated institution
involved_fields Fields commonly involved in this pattern
involved_participants Participants commonly involved
is_major_revision Whether this is a major revision
issues_found Number of issues identified
issues_resolved Number of issues resolved
items_per_day Average items processed per day
items_processed_count Total items processed
kind Kind or type of stage output
krippendorff_alpha Krippendorff's alpha reliability coefficient
last_item_date Date of last item processed
license License governing the dataset
lower_bound Lower bound of the interval
matthews_correlation Matthews correlation coefficient
max_days_between_versions Maximum days allowed between version updates
median_time_per_item Median time per item in minutes
method The resolution method
most_common_conflict_type Most frequently occurring conflict type
name Full name of the author
negative_predictive_value Negative predictive value
notes Additional notes
orcid ORCID identifier for the author
original_decisions Original conflicting decisions or values
output_created_at Creation timestamp
output_label Human-readable label
outputs Output artifacts
overall_agreement Overall agreement rate across all items
param_category Parameter category
param_default Default value
param_description Parameter description
param_id Parameter identifier
param_name Parameter name
param_required Whether parameter is required
param_type Parameter data type
param_value Parameter value
participant_agreement_matrix Matrix showing agreement patterns between participants
participant_avg_time_per_item Average time spent per item (minutes)
participant_id Reference to the participant
participant_notes Additional notes about the participant
participant_role Role(s) of the participant in the review
pattern_id Unique identifier for this pattern
pattern_type Type of conflict pattern
peak_items_per_day Maximum items processed in a single day
pending_conflicts Number of conflicts pending resolution
percent_agreement Simple percentage agreement
precision Positive predictive value
process_avg_time_per_item Average time per item in minutes
process_total_time_hours Total time spent in hours
protocol_snapshot_hash Hash of protocol snapshot at registration time
qc_id Unique identifier for this quality control check
qc_pass_rate Proportion of items passing QC
qc_performed_by Who performed the QC
qc_sample_size Size of the sample checked
qc_timestamp When QC was performed
qc_type Type of quality control performed
range_description Description of a date range
range_end End of a date range
range_start Start of a date range
registered_text Full text of the registered protocol
registration_accuracy_verification Whether registration accuracy was verified
registration_completeness_check Whether registration completeness was verified
registration_compliance_rate Rate of compliance with registration requirements
registration_created_at Timestamp when registration was created
registration_doi DOI assigned to this registration version
registration_last_modified Timestamp when registration was last modified
registration_platforms Platforms where protocol will be registered
registration_policy Policy governing registration amendments and changes
registration_protocol Protocol defining the registration approach
registration_quality_control Quality control for registration process
registration_statistics Statistics about the registration process
registration_status Current status of the registration
registration_template_doi DOI of the registration template
registration_template_version Version of the registration template
registration_timing When registration should occur
registration_type Type of registration (pre-registration, protocol, etc
registration_update_policy Policy for updating registrations
registrations List of registrations for this review protocol
registry_acceptance_date Date when version was accepted by registry
registry_entry_url URL to the registration entry in the registry
registry_name Name of the registry where protocol is registered
registry_submission_date Date when version was submitted to registry
registry_version_id Version identifier assigned by the registry
require_amendment_approval Whether amendments require formal approval
require_content_hash Whether content hash is required for integrity
require_doi Whether DOI is required for registration
require_template Whether registration must use a template
resolution_confidence Confidence in the resolution
resolution_duration Time taken to resolve in minutes
resolution_id Unique identifier for this resolution
resolution_method Method used to resolve the conflict
resolution_methods_used Count of each resolution method used
resolution_notes Notes about the resolution process
resolution_rate Proportion of conflicts resolved
resolution_success_rate Success rate of resolutions
resolution_timestamp When the conflict was resolved
resolved_conflicts Number of conflicts resolved
resolver Person or process that resolved the conflict
resource_uri URI locating the resource
ror_id Research Organization Registry identifier for the institution
sample_method Method used for sampling
sensitivity True positive rate (recall)
snapshot_hash Checksum of the dataset snapshot
specificity True negative rate
stage_description Detailed description
stage_label Human-readable label
stage_registration_id Unique identifier for the stage registration
stage_training_completion_rate Stage training completion rate
stage_training_duration_hours Stage training duration in hours
stage_training_materials_uri URI to stage training materials
stage_training_notes Stage training notes
stage_training_provided Whether stage training was provided
stage_type Type of stage executed
started_at Start time
success_rate Success rate of this method
template_ref Reference to registration template used
throughput_trend Trend in processing speed
time_spent_hours Total time spent in hours
tool_ai_models AI models used by the tool
tool_api_endpoint API endpoint URL
tool_api_version API version
tool_citation Recommended citation
tool_configuration_file URI to configuration file
tool_configuration_parameters Configuration parameters
tool_cost Cost information
tool_documentation_url URL to documentation
tool_export_formats Supported export formats
tool_features_used Features of the tool that were used
tool_id Unique identifier for the tool
tool_import_formats Supported import formats
tool_license_type Type of license
tool_limitations Known limitations
tool_name Name of the tool or platform
tool_notes Additional notes
tool_purpose Purpose for which the tool was used
tool_settings Tool settings description
tool_subscription_level Subscription level or plan
tool_url URL to access the tool
tool_vendor Vendor or organization providing the tool
tool_version Version of the tool
total_amendments Total number of amendments
total_comparisons Total number of comparisons made
total_conflicts Total number of conflicts identified
total_items Total number of items to process
total_registrations Total number of registrations created
total_versions Total number of registration versions
training_completed Training or calibration exercises completed
transparency_commitments Commitments to transparency and open science
upper_bound Upper bound of the interval
version_author Author who created this version
version_control_audit Audit trail for version control
version_date Date when this version was created
version_id Unique identifier for this registration version
version_label Human-readable label for this version
version_number Version number in semantic versioning format
version_reason Reason for creating this version
versions List of registration versions tracking changes over time

Enumerations

Enumeration Description
AmendmentType Types of amendments to a registration
ApprovalStatus Approval status for amendments
ConflictType Types of conflicts that can occur
DatasetKind Types of datasets used in systematic reviews
HashAlgorithm Cryptographic hash algorithms
ParameterType Data types for tool parameters
ParticipantRole Roles that participants can have in the review process
QualityControlType Types of quality control checks
RegistrationStatus Status of a registration
RegistrationType Type of registration
ResolutionMethod Methods for resolving conflicts
SamplingMethod Methods for sampling items for quality control
StageOutputKind Types of outputs that can be produced by review stages
StageType Logical stages of a systematic review (typical flow)
ToolLicenseType Types of tool licenses
ToolPurpose Purposes for which tools can be used

Types

Type Description
Boolean A binary (true or false) value
Curie a compact URI
Date a date (year, month and day) in an idealized calendar
DateOrDatetime Either a date or a datetime
Datetime The combination of a date and time
Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double A real number that conforms to the xsd:double specification
Float A real number that conforms to the xsd:float specification
Integer An integer
Jsonpath A string encoding a JSON Path
Jsonpointer A string encoding a JSON Pointer
Ncname Prefix part of CURIE
Nodeidentifier A URI, CURIE or BNODE that represents a node in a model
Objectidentifier A URI or CURIE that represents an object in the model
Sparqlpath A string encoding a SPARQL Property Path
String A character string
Time A time object represents a (local) time of day, independent of any particular...
Uri a complete URI
Uriorcurie a URI or a CURIE

Subsets

Subset Description