Class: SynthesisProtocol

Protocol defining synthesis approach and methods

URI: revaise:SynthesisProtocol

```mermaid classDiagram class SynthesisProtocol click SynthesisProtocol href "../SynthesisProtocol/" StageProtocol <|-- SynthesisProtocol click StageProtocol href "../StageProtocol/"

  SynthesisProtocol : base_protocol_date

  SynthesisProtocol : base_protocol_description

  SynthesisProtocol : base_protocol_deviations

  SynthesisProtocol : base_protocol_id

  SynthesisProtocol : base_protocol_notes

  SynthesisProtocol : base_protocol_software





    SynthesisProtocol --> "*" ExternalTool : base_protocol_software
    click ExternalTool href "../ExternalTool/"



  SynthesisProtocol : base_protocol_tools





    SynthesisProtocol --> "*" ExternalTool : base_protocol_tools
    click ExternalTool href "../ExternalTool/"



  SynthesisProtocol : base_protocol_training





    SynthesisProtocol --> "0..1" StageTrainingInfo : base_protocol_training
    click StageTrainingInfo href "../StageTrainingInfo/"



  SynthesisProtocol : base_protocol_version

  SynthesisProtocol : data_transformation_rules

  SynthesisProtocol : effect_measures





    SynthesisProtocol --> "*" EffectMeasure : effect_measures
    click EffectMeasure href "../EffectMeasure/"



  SynthesisProtocol : heterogeneity_assessment

  SynthesisProtocol : missing_data_strategy





    SynthesisProtocol --> "0..1" MissingDataStrategy : missing_data_strategy
    click MissingDataStrategy href "../MissingDataStrategy/"



  SynthesisProtocol : planned_comparisons

  SynthesisProtocol : synthesis_approach





    SynthesisProtocol --> "1..*" SynthesisApproach : synthesis_approach
    click SynthesisApproach href "../SynthesisApproach/"

```

Inheritance

• StageProtocol
  • SynthesisProtocol

Slots

Name	Cardinality and Range	Description	Inheritance
synthesis_approach	1..* SynthesisApproach	Overall approach to synthesis (narrative, quantitative, mixed)	direct
planned_comparisons	* String	Planned comparisons and contrasts	direct
effect_measures	* EffectMeasure	Effect measures to be synthesized	direct
heterogeneity_assessment	0..1 String	Approach to assessing heterogeneity	direct
data_transformation_rules	* String	Rules for transforming data for synthesis	direct
missing_data_strategy	0..1 MissingDataStrategy	Strategy for handling missing data	direct
base_protocol_id	1 String	Unique identifier for this stage protocol	StageProtocol
base_protocol_version	0..1 String	Version of the protocol	StageProtocol
base_protocol_date	0..1 Date	Date the protocol was finalized	StageProtocol
base_protocol_description	0..1 String	Detailed description of the protocol	StageProtocol
base_protocol_tools	* ExternalTool	Tools used in this stage	StageProtocol
base_protocol_software	* ExternalTool	Software packages used in this stage	StageProtocol
base_protocol_deviations	* String	Deviations from the planned protocol	StageProtocol
base_protocol_notes	0..1 String	Additional notes about the protocol	StageProtocol
base_protocol_training	0..1 StageTrainingInfo	Training provided for this stage	StageProtocol

Usages

used by	used in	type	used
SynthesisStage	synthesis_protocol	range	SynthesisProtocol

Identifier and Mapping Information

Schema Source

• from schema: https://open-and-sustainable.github.io/revaise-model/schema

Mappings

Mapping Type	Mapped Value
self	revaise:SynthesisProtocol
native	revaise:SynthesisProtocol

LinkML Source

Direct

name: SynthesisProtocol
description: Protocol defining synthesis approach and methods
from_schema: https://open-and-sustainable.github.io/revaise-model/schema
is_a: StageProtocol
slots:
- synthesis_approach
- planned_comparisons
- effect_measures
- heterogeneity_assessment
- data_transformation_rules
- missing_data_strategy
slot_usage:
  synthesis_approach:
    name: synthesis_approach
    description: Overall approach to synthesis (narrative, quantitative, mixed)
    range: SynthesisApproach
    required: true
    multivalued: true
  planned_comparisons:
    name: planned_comparisons
    description: Planned comparisons and contrasts
    range: string
    multivalued: true
  effect_measures:
    name: effect_measures
    description: Effect measures to be synthesized
    range: EffectMeasure
    multivalued: true
  heterogeneity_assessment:
    name: heterogeneity_assessment
    description: Approach to assessing heterogeneity
    range: string
  data_transformation_rules:
    name: data_transformation_rules
    description: Rules for transforming data for synthesis
    range: string
    multivalued: true
  missing_data_strategy:
    name: missing_data_strategy
    description: Strategy for handling missing data
    range: MissingDataStrategy

Induced

name: SynthesisProtocol
description: Protocol defining synthesis approach and methods
from_schema: https://open-and-sustainable.github.io/revaise-model/schema
is_a: StageProtocol
slot_usage:
  synthesis_approach:
    name: synthesis_approach
    description: Overall approach to synthesis (narrative, quantitative, mixed)
    range: SynthesisApproach
    required: true
    multivalued: true
  planned_comparisons:
    name: planned_comparisons
    description: Planned comparisons and contrasts
    range: string
    multivalued: true
  effect_measures:
    name: effect_measures
    description: Effect measures to be synthesized
    range: EffectMeasure
    multivalued: true
  heterogeneity_assessment:
    name: heterogeneity_assessment
    description: Approach to assessing heterogeneity
    range: string
  data_transformation_rules:
    name: data_transformation_rules
    description: Rules for transforming data for synthesis
    range: string
    multivalued: true
  missing_data_strategy:
    name: missing_data_strategy
    description: Strategy for handling missing data
    range: MissingDataStrategy
attributes:
  synthesis_approach:
    name: synthesis_approach
    description: Overall approach to synthesis (narrative, quantitative, mixed)
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: synthesis_approach
    owner: SynthesisProtocol
    domain_of:
    - SynthesisProtocol
    range: SynthesisApproach
    required: true
    multivalued: true
  planned_comparisons:
    name: planned_comparisons
    description: Planned comparisons and contrasts
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: planned_comparisons
    owner: SynthesisProtocol
    domain_of:
    - SynthesisProtocol
    range: string
    multivalued: true
  effect_measures:
    name: effect_measures
    description: Effect measures to be synthesized
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: effect_measures
    owner: SynthesisProtocol
    domain_of:
    - SynthesisProtocol
    range: EffectMeasure
    multivalued: true
  heterogeneity_assessment:
    name: heterogeneity_assessment
    description: Approach to assessing heterogeneity
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: heterogeneity_assessment
    owner: SynthesisProtocol
    domain_of:
    - SynthesisProtocol
    range: string
  data_transformation_rules:
    name: data_transformation_rules
    description: Rules for transforming data for synthesis
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: data_transformation_rules
    owner: SynthesisProtocol
    domain_of:
    - SynthesisProtocol
    range: string
    multivalued: true
  missing_data_strategy:
    name: missing_data_strategy
    description: Strategy for handling missing data
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: missing_data_strategy
    owner: SynthesisProtocol
    domain_of:
    - SynthesisProtocol
    range: MissingDataStrategy
  base_protocol_id:
    name: base_protocol_id
    description: Unique identifier for this stage protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    identifier: true
    alias: base_protocol_id
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_version:
    name: base_protocol_version
    description: Version of the protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_version
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_date:
    name: base_protocol_date
    description: Date the protocol was finalized
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_date
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: date
  base_protocol_description:
    name: base_protocol_description
    description: Detailed description of the protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_description
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_tools:
    name: base_protocol_tools
    description: Tools used in this stage
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_tools
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: ExternalTool
    multivalued: true
  base_protocol_software:
    name: base_protocol_software
    description: Software packages used in this stage
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_software
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: ExternalTool
    multivalued: true
  base_protocol_deviations:
    name: base_protocol_deviations
    description: Deviations from the planned protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_deviations
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: string
    multivalued: true
  base_protocol_notes:
    name: base_protocol_notes
    description: Additional notes about the protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_notes
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_training:
    name: base_protocol_training
    description: Training provided for this stage
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema
    rank: 1000
    alias: base_protocol_training
    owner: SynthesisProtocol
    domain_of:
    - StageProtocol
    range: StageTrainingInfo