Class: ExtractionProtocol

Protocol for the data extraction process

URI: revaise:ExtractionProtocol

```mermaid classDiagram class ExtractionProtocol click ExtractionProtocol href "../ExtractionProtocol/" StageProtocol <|-- ExtractionProtocol click StageProtocol href "../StageProtocol/"

  ExtractionProtocol : base_protocol_date

  ExtractionProtocol : base_protocol_description

  ExtractionProtocol : base_protocol_deviations

  ExtractionProtocol : base_protocol_id

  ExtractionProtocol : base_protocol_notes

  ExtractionProtocol : base_protocol_software





    ExtractionProtocol --> "*" ExternalTool : base_protocol_software
    click ExternalTool href "../ExternalTool/"



  ExtractionProtocol : base_protocol_tools





    ExtractionProtocol --> "*" ExternalTool : base_protocol_tools
    click ExternalTool href "../ExternalTool/"



  ExtractionProtocol : base_protocol_training





    ExtractionProtocol --> "0..1" StageTrainingInfo : base_protocol_training
    click StageTrainingInfo href "../StageTrainingInfo/"



  ExtractionProtocol : base_protocol_version

  ExtractionProtocol : blinding_level





    ExtractionProtocol --> "0..1" BlindingLevel : blinding_level
    click BlindingLevel href "../BlindingLevel/"



  ExtractionProtocol : disagreement_resolution_method





    ExtractionProtocol --> "0..1" ResolutionMethod : disagreement_resolution_method
    click ResolutionMethod href "../ResolutionMethod/"



  ExtractionProtocol : extraction_guidance

  ExtractionProtocol : extraction_order





    ExtractionProtocol --> "0..1" ExtractionOrder : extraction_order
    click ExtractionOrder href "../ExtractionOrder/"



  ExtractionProtocol : independent_extraction

  ExtractionProtocol : minimum_extractors_per_study

```

Inheritance

• StageProtocol
  • ExtractionProtocol

Slots

Name	Cardinality and Range	Description	Inheritance
minimum_extractors_per_study	1 Integer	Minimum number of extractors per study	direct
independent_extraction	0..1 Boolean	Whether extraction is done independently	direct
disagreement_resolution_method	0..1 ResolutionMethod	Method for resolving extraction disagreements	direct
extraction_order	0..1 ExtractionOrder	Order in which studies are extracted	direct
blinding_level	0..1 BlindingLevel	Level of blinding during extraction	direct
extraction_guidance	0..1 String	Detailed guidance for extractors	direct
base_protocol_id	1 String	Unique identifier for this stage protocol	StageProtocol
base_protocol_version	0..1 String	Version of the protocol	StageProtocol
base_protocol_date	0..1 Date	Date the protocol was finalized	StageProtocol
base_protocol_description	0..1 String	Detailed description of the protocol	StageProtocol
base_protocol_tools	* ExternalTool	Tools used in this stage	StageProtocol
base_protocol_software	* ExternalTool	Software packages used in this stage	StageProtocol
base_protocol_deviations	* String	Deviations from the planned protocol	StageProtocol
base_protocol_notes	0..1 String	Additional notes about the protocol	StageProtocol
base_protocol_training	0..1 StageTrainingInfo	Training provided for this stage	StageProtocol

Usages

used by	used in	type	used
ExtractionStage	extraction_protocol	range	ExtractionProtocol

Identifier and Mapping Information

Schema Source

• from schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction

Mappings

Mapping Type	Mapped Value
self	revaise:ExtractionProtocol
native	revaise:ExtractionProtocol

LinkML Source

Direct

name: ExtractionProtocol
description: Protocol for the data extraction process
from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
is_a: StageProtocol
slots:
- minimum_extractors_per_study
- independent_extraction
- disagreement_resolution_method
- extraction_order
- blinding_level
- extraction_guidance
slot_usage:
  minimum_extractors_per_study:
    name: minimum_extractors_per_study
    description: Minimum number of extractors per study
    range: integer
    required: true
  independent_extraction:
    name: independent_extraction
    description: Whether extraction is done independently
    range: boolean
  disagreement_resolution_method:
    name: disagreement_resolution_method
    description: Method for resolving extraction disagreements
    range: ResolutionMethod
  extraction_order:
    name: extraction_order
    description: Order in which studies are extracted
    range: ExtractionOrder
  blinding_level:
    name: blinding_level
    description: Level of blinding during extraction
    range: BlindingLevel
  extraction_guidance:
    name: extraction_guidance
    description: Detailed guidance for extractors
    range: string

Induced

name: ExtractionProtocol
description: Protocol for the data extraction process
from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
is_a: StageProtocol
slot_usage:
  minimum_extractors_per_study:
    name: minimum_extractors_per_study
    description: Minimum number of extractors per study
    range: integer
    required: true
  independent_extraction:
    name: independent_extraction
    description: Whether extraction is done independently
    range: boolean
  disagreement_resolution_method:
    name: disagreement_resolution_method
    description: Method for resolving extraction disagreements
    range: ResolutionMethod
  extraction_order:
    name: extraction_order
    description: Order in which studies are extracted
    range: ExtractionOrder
  blinding_level:
    name: blinding_level
    description: Level of blinding during extraction
    range: BlindingLevel
  extraction_guidance:
    name: extraction_guidance
    description: Detailed guidance for extractors
    range: string
attributes:
  minimum_extractors_per_study:
    name: minimum_extractors_per_study
    description: Minimum number of extractors per study
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: minimum_extractors_per_study
    owner: ExtractionProtocol
    domain_of:
    - ExtractionProtocol
    range: integer
    required: true
  independent_extraction:
    name: independent_extraction
    description: Whether extraction is done independently
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: independent_extraction
    owner: ExtractionProtocol
    domain_of:
    - ExtractionProtocol
    range: boolean
  disagreement_resolution_method:
    name: disagreement_resolution_method
    description: Method for resolving extraction disagreements
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: disagreement_resolution_method
    owner: ExtractionProtocol
    domain_of:
    - ExtractionProtocol
    range: ResolutionMethod
  extraction_order:
    name: extraction_order
    description: Order in which studies are extracted
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: extraction_order
    owner: ExtractionProtocol
    domain_of:
    - ExtractionProtocol
    range: ExtractionOrder
  blinding_level:
    name: blinding_level
    description: Level of blinding during extraction
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: blinding_level
    owner: ExtractionProtocol
    domain_of:
    - ExtractionProtocol
    range: BlindingLevel
  extraction_guidance:
    name: extraction_guidance
    description: Detailed guidance for extractors
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: extraction_guidance
    owner: ExtractionProtocol
    domain_of:
    - ExtractionProtocol
    range: string
  base_protocol_id:
    name: base_protocol_id
    description: Unique identifier for this stage protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    identifier: true
    alias: base_protocol_id
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_version:
    name: base_protocol_version
    description: Version of the protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_version
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_date:
    name: base_protocol_date
    description: Date the protocol was finalized
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_date
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: date
  base_protocol_description:
    name: base_protocol_description
    description: Detailed description of the protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_description
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_tools:
    name: base_protocol_tools
    description: Tools used in this stage
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_tools
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: ExternalTool
    multivalued: true
  base_protocol_software:
    name: base_protocol_software
    description: Software packages used in this stage
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_software
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: ExternalTool
    multivalued: true
  base_protocol_deviations:
    name: base_protocol_deviations
    description: Deviations from the planned protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_deviations
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: string
    multivalued: true
  base_protocol_notes:
    name: base_protocol_notes
    description: Additional notes about the protocol
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_notes
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: string
  base_protocol_training:
    name: base_protocol_training
    description: Training provided for this stage
    from_schema: https://open-and-sustainable.github.io/revaise-model/schema/stages/extraction
    rank: 1000
    alias: base_protocol_training
    owner: ExtractionProtocol
    domain_of:
    - StageProtocol
    range: StageTrainingInfo